Stem-loop ppc-mir-8359

Accession

MI0027072

Description

Pristionchus pacificus ppc-mir-8359 precursor miRNA

Sequence

ACGAGAGAACGAAUGUCUGAUUcgccccauuccgcucucgaAUCAGACAUUCGUUCUCUCGCU
.(((((((((((((((((((((((..............)))))))))))))))))))))))..

Structure

-A                       ccccau 
  CGAGAGAACGAAUGUCUGAUUcg      u
  |||||||||||||||||||||||       
  GCUCUCUUGCUUACAGACUAagc      c
UC                       ucucgc 

Annotation confidence Not enough data

Genome context

ABKE03000104.1: 2295643-2295705 [+]

Mature ppc-miR-8359-5p

• Accession: MIMAT0033280
• Description: Pristionchus pacificus ppc-miR-8359-5p mature miRNA
• Sequence: 1 - ACGAGAGAACGAAUGUCUGAUU - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8359-3p

• Accession: MIMAT0033281
• Description: Pristionchus pacificus ppc-miR-8359-3p mature miRNA
• Sequence: 42 - AUCAGACAUUCGUUCUCUCGCU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260