Stem-loop ppc-mir-8353

Accession

MI0027065

Description

Pristionchus pacificus ppc-mir-8353 precursor miRNA

Sequence

AUACAAGUCAGAUUCCUUUUCGCaguagaugaaguugcGAAAUGAGUCUGACUUGUAUGA
(((((((((((((((..((((((((.........)))))))).)))))))))))))))..

Structure

--               CU        uag 
  AUACAAGUCAGAUUC  UUUCGCag   a
  |||||||||||||||  ||||||||   u
  UAUGUUCAGUCUGAG  AAAGcguu   g
AG               -U        gaa 

Annotation confidence Not enough data

Genome context

ABKE03000131.1: 502556-502615 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from ppc-mir-8353

Mature ppc-miR-8353-5p

• Accession: MIMAT0033266
• Description: Pristionchus pacificus ppc-miR-8353-5p mature miRNA
• Sequence: 1 - AUACAAGUCAGAUUCCUUUUCGC - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8353-3p

• Accession: MIMAT0033267
• Description: Pristionchus pacificus ppc-miR-8353-3p mature miRNA
• Sequence: 39 - GAAAUGAGUCUGACUUGUAUGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260