Stem-loop ppc-mir-8218b

Accession

MI0027056

Description

Pristionchus pacificus ppc-mir-8218b precursor miRNA

Sequence

CGAGGGCCACCAGGGUCUGAGCUauagcaaaagaaugucgCUCAGCCGUGAUGACCCUCAAG
.(((((.((.((.((.((((((.(((.........))).)))))))).)).)).)))))...

Structure

--C     C  C  G  U      U   gca 
   GAGGG CA CA GG CUGAGC aua   a
   ||||| || || || |||||| |||   a
   CUCCC GU GU CC GACUCg ugu   a
GAA     A  A  G  -      c   aag 

Annotation confidence Not enough data

Genome context

ABKE03000019.1: 82038-82099 [-]

Mature ppc-miR-8218b-5p

• Accession: MIMAT0033248
• Description: Pristionchus pacificus ppc-miR-8218b-5p mature miRNA
• Sequence: 1 - CGAGGGCCACCAGGGUCUGAGCU - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8218b-3p

• Accession: MIMAT0033249
• Description: Pristionchus pacificus ppc-miR-8218b-3p mature miRNA
• Sequence: 41 - CUCAGCCGUGAUGACCCUCAAG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260