Stem-loop ppc-mir-8327

Accession

MI0027030

Description

Pristionchus pacificus ppc-mir-8327 precursor miRNA

Sequence

AGGUUUUGUAUUUCGUUUUUUUACUugaauauuggaagcaagUAUGACGGAUUUGCAAGAUCUGU
((((((((((.((((((....((((((...........)))))).))))))..))))))))))..

Structure

--          -U      UUUU      aaua 
  AGGUUUUGUA  UUCGUU    UACUug    u
  ||||||||||  ||||||    ||||||    u
  UCUAGAACGU  AGGCAG    AUgaac    g
UG          UU      ---U      gaag 

Annotation confidence Not enough data

Genome context

ABKE03000038.1: 1153480-1153544 [-]

Mature ppc-miR-8327-5p

• Accession: MIMAT0033198
• Description: Pristionchus pacificus ppc-miR-8327-5p mature miRNA
• Sequence: 1 - AGGUUUUGUAUUUCGUUUUUUUACU - 25
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8327-3p

• Accession: MIMAT0033199
• Description: Pristionchus pacificus ppc-miR-8327-3p mature miRNA
• Sequence: 43 - UAUGACGGAUUUGCAAGAUCUGU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260