Stem-loop ppc-mir-8318

Accession

MI0027018

Description

Pristionchus pacificus ppc-mir-8318 precursor miRNA

Sequence

GUUAUGAUCGAUGAAGCACGUGcgcauaaugcgcaUCGGCUUCAUCGAUUAUGACC
(((((((((((((((((.((((((((...)))))).))))))))))))))))))).

Structure

-                 A  -      u 
 GUUAUGAUCGAUGAAGC CG UGcgca  
 ||||||||||||||||| || |||||| a
 CAGUAUUAGCUACUUCG GC acgcgu  
C                 -  U      a 

Annotation confidence Not enough data

Genome context

ABKE03000041.1: 1949102-1949157 [+]

Mature ppc-miR-8318-5p

• Accession: MIMAT0033174
• Description: Pristionchus pacificus ppc-miR-8318-5p mature miRNA
• Sequence: 1 - GUUAUGAUCGAUGAAGCACGUG - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8318-3p

• Accession: MIMAT0033175
• Description: Pristionchus pacificus ppc-miR-8318-3p mature miRNA
• Sequence: 36 - UCGGCUUCAUCGAUUAUGACC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260