Stem-loop ppc-mir-8317b

Accession

MI0027017

Description

Pristionchus pacificus ppc-mir-8317b precursor miRNA

Sequence

CAUGGGCUUUUCGAGGAUAUUCGCuauguugcaugcGAAUACCUCGCCUAGUCUAAGG
..((((((...(((((.(((((((.(((...)))))))))))))))...))))))...

Structure

-CA      UUU     A       u   u 
   UGGGCU   CGAGG UAUUCGC aug  
   ||||||   ||||| ||||||| ||| u
   AUCUGA   GCUCC AUAAGcg uac  
GGA      UCC     -       -   g 

Annotation confidence Not enough data

Genome context

ABKE03000013.1: 161356-161413 [-]

Mature ppc-miR-8317b-5p

• Accession: MIMAT0033172
• Description: Pristionchus pacificus ppc-miR-8317b-5p mature miRNA
• Sequence: 1 - CAUGGGCUUUUCGAGGAUAUUCGC - 24
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8317b-3p

• Accession: MIMAT0033173
• Description: Pristionchus pacificus ppc-miR-8317b-3p mature miRNA
• Sequence: 37 - GAAUACCUCGCCUAGUCUAAGG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260