Stem-loop ppc-mir-8364p

Accession

MI0027010

Description

Pristionchus pacificus ppc-mir-8364p precursor miRNA

Sequence

UCCAUUUCCCAUGCUCUCUCGCcugccagaaagggCGAGAGAGCAAGUGAACUGGAGA
((((.(((.(.(((((((((((((........))))))))))))).).))).))))..

Structure

--    U   C A             gcc 
  UCCA UUC C UGCUCUCUCGCcu   a
  |||| ||| | |||||||||||||    
  AGGU AAG G ACGAGAGAGCggg   g
AG    C   U A             aaa 

Annotation confidence Not enough data

Genome context

ABKE03000028.1: 1617404-1617461 [+]

Mature ppc-miR-8364p-5p

• Accession: MIMAT0033159
• Description: Pristionchus pacificus ppc-miR-8364p-5p mature miRNA
• Sequence: 1 - UCCAUUUCCCAUGCUCUCUCGC - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8364p-3p

• Accession: MIMAT0033160
• Description: Pristionchus pacificus ppc-miR-8364p-3p mature miRNA
• Sequence: 36 - CGAGAGAGCAAGUGAACUGGAGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260