Stem-loop ppc-mir-360

Accession

MI0026994

Description

Pristionchus pacificus ppc-mir-360 precursor miRNA

Sequence

UUGUGACCGUUGUUACGGGCAcugcaucgaugccggguugCCCGUCCCCUCGGUUACACCU
.((((((((..(..((((((((((((....)))..)).)))))))..)..))))))))...

Structure

--U        UU UU       -  --   u 
   UGUGACCG  G  ACGGGCA cu  gca c
   ||||||||  |  ||||||| ||  |||  
   ACAUUGGC  C  UGCCCgu gg  cgu g
UCC        UC CC       u  gc   a 

Annotation confidence Not enough data

Genome context

ABKE03000005.1: 774046-774106 [-]

Mature ppc-miR-360-5p

• Accession: MIMAT0033129
• Description: Pristionchus pacificus ppc-miR-360-5p mature miRNA
• Sequence: 1 - UUGUGACCGUUGUUACGGGCA - 21
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-360-3p

• Accession: MIMAT0033130
• Description: Pristionchus pacificus ppc-miR-360-3p mature miRNA
• Sequence: 41 - CCCGUCCCCUCGGUUACACCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260