Stem-loop ppc-mir-8303-1

Accession

MI0026993

Description

Pristionchus pacificus ppc-mir-8303-1 precursor miRNA

Sequence

AAGCUGACGGGGUGUAAUGACAaucauaugacgaugUCAAUGCACCGCGUUGGCUCCA
.((((((((.((((((.(((((.((.......))))))).)))))).))))))))...

Structure

--A        G      A     a  au 
   AGCUGACG GGUGUA UGACA uc  a
   |||||||| |||||| ||||| ||  u
   UCGGUUGC CCACGU ACUgu ag  g
ACC        G      A     -  ca 

Annotation confidence Not enough data

Genome context

ABKE03000094.1: 922890-922947 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ppc-mir-8303-1

Mature ppc-miR-8303-5p

• Accession: MIMAT0033127
• Description: Pristionchus pacificus ppc-miR-8303-5p mature miRNA
• Sequence: 1 - AAGCUGACGGGGUGUAAUGACA - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8303-3p

• Accession: MIMAT0033128
• Description: Pristionchus pacificus ppc-miR-8303-3p mature miRNA
• Sequence: 37 - UCAAUGCACCGCGUUGGCUCCA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260