Stem-loop ppc-mir-8301

Accession

MI0026990

Description

Pristionchus pacificus ppc-mir-8301 precursor miRNA

Sequence

UACCGAGGAUUGUUUGUUCACUuugauauuugagcacgagUGAACAAGAAAUCUCGGUGGG
(((((((.(((.(((((((((((((.........)).))))))))))).))))))))))..

Structure

--       G   G           -  aua 
  UACCGAG AUU UUUGUUCACUu ug   u
  ||||||| ||| ||||||||||| ||   u
  GUGGCUC UAA GAACAAGUgag ac   u
GG       -   A           c  gag 

Annotation confidence Not enough data

Genome context

ABKE03000074.1: 103411-103471 [-]

Mature ppc-miR-8301-5p

• Accession: MIMAT0033121
• Description: Pristionchus pacificus ppc-miR-8301-5p mature miRNA
• Sequence: 1 - UACCGAGGAUUGUUUGUUCACU - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8301-3p

• Accession: MIMAT0033122
• Description: Pristionchus pacificus ppc-miR-8301-3p mature miRNA
• Sequence: 41 - UGAACAAGAAAUCUCGGUGGG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260