Stem-loop ppc-mir-8298

Accession

MI0026986

Description

Pristionchus pacificus ppc-mir-8298 precursor miRNA

Sequence

UGUUUCAUCAGAUGCUCAUcuaucagacuuucacuaucuuccuaaUGGGCCUCUGAUUGAGAUUGC
.(((((((((((.((((((.....(((.........))).....)))))).))))).))))))...

Structure

--U      -     U      cuauc   cuu 
   GUUUCA UCAGA GCUCAU     aga   u
   |||||| ||||| ||||||     |||   c
   UAGAGU AGUCU CGGGUa     ucu   a
CGU      U     C      auccu   auc 

Annotation confidence Not enough data

Genome context

ABKE03000093.1: 8998747-8998812 [+]

Mature ppc-miR-8298-5p

• Accession: MIMAT0033113
• Description: Pristionchus pacificus ppc-miR-8298-5p mature miRNA
• Sequence: 1 - UGUUUCAUCAGAUGCUCAU - 19
• Evidence: experimental ; SOLiD [1]

Mature ppc-miR-8298-3p

• Accession: MIMAT0033114
• Description: Pristionchus pacificus ppc-miR-8298-3p mature miRNA
• Sequence: 46 - UGGGCCUCUGAUUGAGAUUGC - 66
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260