Stem-loop ppc-mir-8281

Accession

MI0026961

Description

Pristionchus pacificus ppc-mir-8281 precursor miRNA

Sequence

GUGGGAAAUGGCUAACUUAUUcauuauugaaauguaaUAAGCAAGCUCUUUUCCCAGGC
.(((((((.((((..((((((((((.....)))).))))))..))))..)))))))...

Structure

--G       -U    AA      -    a 
   UGGGAAA  GGCU  CUUAUU cauu u
   |||||||  ||||  |||||| |||| u
   ACCCUUU  UCGA  GAAUaa guaa g
CGG       UC    AC      u    a 

Annotation confidence Not enough data

Genome context

ABKE03000019.1: 53182-53240 [-]

Mature ppc-miR-8281-5p

• Accession: MIMAT0033065
• Description: Pristionchus pacificus ppc-miR-8281-5p mature miRNA
• Sequence: 1 - GUGGGAAAUGGCUAACUUAUU - 21
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8281-3p

• Accession: MIMAT0033066
• Description: Pristionchus pacificus ppc-miR-8281-3p mature miRNA
• Sequence: 38 - UAAGCAAGCUCUUUUCCCAGGC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260