Stem-loop ppc-mir-8279

Accession

MI0026957

Description

Pristionchus pacificus ppc-mir-8279 precursor miRNA

Sequence

AACCCGAUUUUCAUGGAUCUUUguguauuaugaaguccaAGAUUCAUGUCAAUCUGGUCUC
.(((.((((..((((((((((.(.............).))))))))))..)))).)))...

Structure

--A   C    UU          U uguau 
   ACC GAUU  CAUGGAUCUU g     u
   ||| ||||  |||||||||| |     a
   UGG CUAA  GUACUUAGAa c     u
CUC   U    CU          c ugaag 

Annotation confidence Not enough data

Genome context

ABKE03000050.1: 1887639-1887699 [-]

Mature ppc-miR-8279-5p

• Accession: MIMAT0033057
• Description: Pristionchus pacificus ppc-miR-8279-5p mature miRNA
• Sequence: 1 - AACCCGAUUUUCAUGGAUCUUU - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8279-3p

• Accession: MIMAT0033058
• Description: Pristionchus pacificus ppc-miR-8279-3p mature miRNA
• Sequence: 40 - AGAUUCAUGUCAAUCUGGUCUC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260