Stem-loop ppc-mir-8278

Accession

MI0026956

Description

Pristionchus pacificus ppc-mir-8278 precursor miRNA

Sequence

UCGUUUCAGACGCUCCUUUUCCucgacaaauugaaugaggUAAAGGUCCGAUCUGAGAUGAGA
((((((((((((..(((((.((((............)))).)))))..)).))))))))))..

Structure

--          -  CU     U    gacaa 
  UCGUUUCAGA CG  CCUUU CCuc     a
  |||||||||| ||  ||||| ||||      
  AGUAGAGUCU GC  GGAAA ggag     u
AG          A  CU     U    uaagu 

Annotation confidence Not enough data

Genome context

ABKE03000129.1: 320866-320928 [+]

Mature ppc-miR-8278-5p

• Accession: MIMAT0033055
• Description: Pristionchus pacificus ppc-miR-8278-5p mature miRNA
• Sequence: 1 - UCGUUUCAGACGCUCCUUUUCC - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8278-3p

• Accession: MIMAT0033056
• Description: Pristionchus pacificus ppc-miR-8278-3p mature miRNA
• Sequence: 41 - UAAAGGUCCGAUCUGAGAUGAGA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260