Stem-loop ppc-mir-8364k

Accession

MI0026942

Description

Pristionchus pacificus ppc-mir-8364k precursor miRNA

Sequence

UCUUUAUUUCCCAUACUCUCUCAccgggcagagaggugaGAGAGUCUGUGAAAUGAAGAGA
((((((((((.((.(((((((((((.........))))))))))).)).))))))))))..

Structure

--          C  U           ggg 
  UCUUUAUUUC CA ACUCUCUCAcc   c
  |||||||||| || |||||||||||   a
  AGAAGUAAAG GU UGAGAGagugg   g
AG          U  C           aga 

Annotation confidence Not enough data

Genome context

ABKE03000092.1: 3901409-3901469 [+]

Mature ppc-miR-8364k-5p

• Accession: MIMAT0033028
• Description: Pristionchus pacificus ppc-miR-8364k-5p mature miRNA
• Sequence: 1 - UCUUUAUUUCCCAUACUCUCUCA - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8364k-3p

• Accession: MIMAT0033029
• Description: Pristionchus pacificus ppc-miR-8364k-3p mature miRNA
• Sequence: 40 - GAGAGUCUGUGAAAUGAAGAGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260