Stem-loop ppc-mir-8268

Accession

MI0026939

Description

Pristionchus pacificus ppc-mir-8268 precursor miRNA

Sequence

GGCUCUCGGUCGAGGAAUGAACaggcguccuguUCUUCUAAGUCCGAUGGCUAGC
((((.((((.(..((((.(((((((...)))))))))))..).)))).))))...

Structure

---    C    U GA    U       c 
   GGCU UCGG C  GGAA GAACagg  
   |||| |||| |  |||| ||||||| g
   UCGG AGCC G  UCUU CUugucc  
CGA    U    U AA    -       u 

Annotation confidence Not enough data

Genome context

ABKE03000089.1: 1806249-1806303 [+]

Mature ppc-miR-8268-5p

• Accession: MIMAT0033022
• Description: Pristionchus pacificus ppc-miR-8268-5p mature miRNA
• Sequence: 1 - GGCUCUCGGUCGAGGAAUGAAC - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8268-3p

• Accession: MIMAT0033023
• Description: Pristionchus pacificus ppc-miR-8268-3p mature miRNA
• Sequence: 34 - UCUUCUAAGUCCGAUGGCUAGC - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260