Stem-loop ppc-mir-8267

Accession

MI0026938

Description

Pristionchus pacificus ppc-mir-8267 precursor miRNA

Sequence

UGAUUCUUCUCUUGUCAUCGGAaaauauuuucUCAUGACUCUAGAAGAAUCAGC
((((((((((...(((((.(((((....))))).)))))...))))))))))..

Structure

--          CUU     C     a 
  UGAUUCUUCU   GUCAU GGAaa u
  ||||||||||   ||||| |||||  
  ACUAAGAAGA   CAGUA Ucuuu a
CG          UCU     C     u 

Annotation confidence Not enough data

Genome context

ABKE03000048.1: 428850-428903 [+]

Mature ppc-miR-8267-5p

• Accession: MIMAT0033020
• Description: Pristionchus pacificus ppc-miR-8267-5p mature miRNA
• Sequence: 1 - UGAUUCUUCUCUUGUCAUCGGA - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8267-3p

• Accession: MIMAT0033021
• Description: Pristionchus pacificus ppc-miR-8267-3p mature miRNA
• Sequence: 33 - UCAUGACUCUAGAAGAAUCAGC - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260