Stem-loop ppc-mir-8261

Accession

MI0026925

Description

Pristionchus pacificus ppc-mir-8261 precursor miRNA

Sequence

AUCUCCACACCGCGUACUGUCUagaugaccgucgagguagAUAGUAUGCGGCGUGAAGACCU
.(((.(((.(((((((((((((.....(((.....)))))))))))))))).))).)))...

Structure

--A   C   A             agaug   g 
   UCU CAC CCGCGUACUGUCU     acc u
   ||| ||| |||||||||||||     ||| c
   AGA GUG GGCGUAUGAUAga     ugg g
UCC   A   C             -----   a 

Annotation confidence Not enough data

Genome context

ABKE03000062.1: 3882227-3882288 [+]

Mature ppc-miR-8261-5p

• Accession: MIMAT0032995
• Description: Pristionchus pacificus ppc-miR-8261-5p mature miRNA
• Sequence: 1 - AUCUCCACACCGCGUACUGUCU - 22
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature ppc-miR-8261-3p

• Accession: MIMAT0032996
• Description: Pristionchus pacificus ppc-miR-8261-3p mature miRNA
• Sequence: 41 - AUAGUAUGCGGCGUGAAGACCU - 62
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260