Accession
MI0026897
Description
Pristionchus pacificus
ppc-mir-2238i precursor miRNA
Sequence
CCGUUCACUCAUCUCGUCAAUCGaugauugaauuucgAGUGACAGAUCAUCAGUGCGCGAGA
.(((.((((.((((.((((.((((..........)))).))))))))....)))).)))...
.(((.((((.((((.((((.((((..........)))).))))))))....)))).)))...
Structure
--C U ---C C A ugau CGU CACU AUCU GUCA UCGa u ||| |||| |||| |||| |||| GCG GUGA UAGA CAGU Agcu g AGA C CUAC - G uuaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
ABKE03000048.1: 447717-447778 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ppc-mir-2238i
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-2238i-5p
| Accession | MIMAT0032940 |
| Description | Pristionchus pacificus ppc-miR-2238i-5p mature miRNA |
| Sequence | 1 - CCGUUCACUCAUCUCGUCAAUCG - 23 |
| Evidence |
experimental
Illumina [1], SOLiD [1] |
Mature ppc-miR-2238i-3p
| Accession | MIMAT0032941 |
| Description | Pristionchus pacificus ppc-miR-2238i-3p mature miRNA |
| Sequence | 38 - AGUGACAGAUCAUCAGUGCGCGAGA - 62 |
| Evidence |
experimental
Illumina [1], SOLiD [1] |
References
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