Stem-loop ppc-mir-8234

Accession

MI0026888

Description

Pristionchus pacificus ppc-mir-8234 precursor miRNA

Sequence

CGUGAGAAAAUGGGUUGGAGCcacugcggccacacuucguggCUCCAUCCCAUCUUCUUUCGGA
((.(((((.(((((.(((((((((...(......)...))))))))).))))).))))).))..

Structure

--  U     A     U         ugc gc 
  CG GAGAA AUGGG UGGAGCcac   g  c
  || ||||| ||||| |||||||||   |   
  GC UUCUU UACCC ACCUCggug   c  a
AG  U     C     U         cuu ac 

Annotation confidence Not enough data

Genome context

ABKE03000119.1: 1269922-1269985 [+]

Mature ppc-miR-8234-5p

• Accession: MIMAT0032922
• Description: Pristionchus pacificus ppc-miR-8234-5p mature miRNA
• Sequence: 1 - CGUGAGAAAAUGGGUUGGAGC - 21
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature ppc-miR-8234-3p

• Accession: MIMAT0032923
• Description: Pristionchus pacificus ppc-miR-8234-3p mature miRNA
• Sequence: 43 - CUCCAUCCCAUCUUCUUUCGGA - 64
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260