Stem-loop ppc-mir-8232

Accession

MI0026883

Description

Pristionchus pacificus ppc-mir-8232 precursor miRNA

Sequence

UGUCAUUCUGUCCCGAGCGACCugugccaccgcacagcuuggUCACCGGGAGCAGAGUGGCUAC
.((((((((((((((.(.(((((((((....)))))....)))).)))))).)))))))))...

Structure

--U         -     A C    ----     c 
   GUCAUUCUG UCCCG G GACC    ugugc a
   ||||||||| ||||| | ||||    |||||  
   CGGUGAGAC AGGGC C CUgg    acacg c
CAU         G     - A    uucg     c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ppc-miR-8232-5p

• Accession: MIMAT0032912
• Description: Pristionchus pacificus ppc-miR-8232-5p mature miRNA
• Sequence: 1 - UGUCAUUCUGUCCCGAGCGACC - 22
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature ppc-miR-8232-3p

• Accession: MIMAT0032913
• Description: Pristionchus pacificus ppc-miR-8232-3p mature miRNA
• Sequence: 43 - UCACCGGGAGCAGAGUGGCUAC - 64
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260