Stem-loop ppc-mir-59

Accession

MI0026879

Description

Pristionchus pacificus ppc-mir-59 precursor miRNA

Sequence

GCGUCAAAUUUACGAUCCGGAAcgugccuugaauccgcuuUCGAAUCGUCAUCUUUGAUGCAA
((((((((..((((((.(((((.(((.........)))))))).))))).)..))))))))..

Structure

--        UU -     C     c   ccu 
  GCGUCAAA  U ACGAU CGGAA gug   u
  ||||||||  | ||||| ||||| |||   g
  CGUAGUUU  A UGCUA GCUuu cgc   a
AA        CU C     A     -   cua 

Annotation confidence Not enough data

Genome context

ABKE03000076.1: 501113-501175 [+]

Mature ppc-miR-59-5p

• Accession: MIMAT0032904
• Description: Pristionchus pacificus ppc-miR-59-5p mature miRNA
• Sequence: 1 - GCGUCAAAUUUACGAUCCGGAA - 22
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature ppc-miR-59-3p

• Accession: MIMAT0032905
• Description: Pristionchus pacificus ppc-miR-59-3p mature miRNA
• Sequence: 41 - UCGAAUCGUCAUCUUUGAUGCAA - 63
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260