Stem-loop ppc-mir-8218a

Accession

MI0026860

Description

Pristionchus pacificus ppc-mir-8218a precursor miRNA

Sequence

CGAGGGCGACCAGGGUCUGAGCgcuugcgauugaaugccacUCAGACAAUGGUGACUCUCAAG
.(((((..((((..(((((((.(...((........))).)))))))..))))..)))))...

Structure

--C     CG    GG       C cuu  gau 
   GAGGG  ACCA  GUCUGAG g   gc   u
   |||||  ||||  ||||||| |   ||    
   CUCUC  UGGU  CAGACUc c   cg   g
GAA     AG    AA       a ---  uaa 

Annotation confidence Not enough data

Genome context

ABKE03000094.1: 29550-29612 [+]

Mature ppc-miR-8218a-5p

• Accession: MIMAT0032866
• Description: Pristionchus pacificus ppc-miR-8218a-5p mature miRNA
• Sequence: 1 - CGAGGGCGACCAGGGUCUGAGC - 22
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature ppc-miR-8218a-3p

• Accession: MIMAT0032867
• Description: Pristionchus pacificus ppc-miR-8218a-3p mature miRNA
• Sequence: 42 - UCAGACAAUGGUGACUCUCAAG - 63
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260