Stem-loop ssa-mir-9a-5

Accession

MI0026773

Description

Salmo salar ssa-mir-9a-5 precursor miRNA

Sequence

UCUUUGGUUAUCUAGCUGUAUGAguguuaaauaccugucAUAAAGCUAGAUAACCGAAAGU
..(((((((((((((((.(((((((((...))))...))))).)))))))))))))))...

Structure

-UC               G     ---    u 
   UUUGGUUAUCUAGCU UAUGA   gugu  
   ||||||||||||||| |||||   |||| a
   AAGCCAAUAGAUCGA AUAcu   caua  
UGA               A     guc    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-9a-5p

• Accession: MIMAT0032721
• Description: Salmo salar ssa-miR-9a-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-9a-5-3p

• Accession: MIMAT0032726
• Description: Salmo salar ssa-miR-9a-5-3p mature miRNA
• Sequence: 40 - AUAAAGCUAGAUAACCGAAAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482