Stem-loop ssa-mir-462b

Accession

MI0026713

Description

Salmo salar ssa-mir-462b precursor miRNA

Literature search

1 open access papers mention ssa-mir-462b
(7 sentences)

Sequence

UAACGGAACCCAUAAAGCAGCUGugucuuucaaaggcaGCUGGAUGUGAGCUCCGUUUCC
.((((((.(.((((...(((((((.(.......).)))))))..)))).).))))))...

Structure

--U      A C    AAG       g cu 
   AACGGA C CAUA   CAGCUGu u  u
   |||||| | ||||   ||||||| |  u
   UUGCCU G GUGU   GUCGacg a  c
CCU      C A    -AG       g aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-462b-5p

• Accession: MIMAT0032655
• Description: Salmo salar ssa-miR-462b-5p mature miRNA
• Sequence: 1 - UAACGGAACCCAUAAAGCAGCUG - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-462b-3p

• Accession: MIMAT0032656
• Description: Salmo salar ssa-miR-462b-3p mature miRNA
• Sequence: 39 - GCUGGAUGUGAGCUCCGUUUCC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482