Stem-loop ssa-mir-26a-1

Accession

MI0026649

Description

Salmo salar ssa-mir-26a-1 precursor miRNA

Literature search

2 open access papers mention ssa-mir-26a-1
(6 sentences)

Sequence

UUCAAGUAAUCCAGGAUAGGCUgguucccgccagcacggCCUAUUCUCGAUUACUUGUUUC
..(((((((((.((((((((((((((......))).))))))))))).)))))))))....

Structure

--UU         C           -   cc 
    CAAGUAAUC AGGAUAGGCUg guu  c
    ||||||||| ||||||||||| |||   
    GUUCAUUAG UCUUAUCCggc cga  g
CUUU         C           a   cc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-26a-5p

• Accession: MIMAT0032563
• Description: Salmo salar ssa-miR-26a-5p mature miRNA
• Sequence: 1 - UUCAAGUAAUCCAGGAUAGGCU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-26a-3p

• Accession: MIMAT0032564
• Description: Salmo salar ssa-miR-26a-3p mature miRNA
• Sequence: 40 - CCUAUUCUCGAUUACUUGUUUC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482