Stem-loop ssa-mir-22a

Accession

MI0026633

Description

Salmo salar ssa-mir-22a precursor miRNA

Sequence

AGUUCUUCACUGGCAAGCUUUAuguccuuguguaccaacuaAAGCUGCCAGCUGAAGAACUGU
(((((((((((((((.((((((.((............)))))))))))))).)))))))))..

Structure

--         -      A      u  ccuug 
  AGUUCUUCA CUGGCA GCUUUA gu     u
  ||||||||| |||||| |||||| ||      
  UCAAGAAGU GACCGU CGAAau ca     g
UG         C      -      -  accau 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-22a-5p

• Accession: MIMAT0032544
• Description: Salmo salar ssa-miR-22a-5p mature miRNA
• Sequence: 1 - AGUUCUUCACUGGCAAGCUUUA - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-22a-3p

• Accession: MIMAT0032545
• Description: Salmo salar ssa-miR-22a-3p mature miRNA
• Sequence: 42 - AAGCUGCCAGCUGAAGAACUGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482