Stem-loop ssa-mir-144

Accession

MI0026504

Description

Salmo salar ssa-mir-144 precursor miRNA

Literature search

2 open access papers mention ssa-mir-144
(6 sentences)

Sequence

GGAUAUCAUCAUAUACUGUAAGUUcguuauggugacaCUACAGUAUAGAUGAUGUAC
..((((((((.(((((((((.(((((......))).)))))))))))))))))))..

Structure

GG        A         A  -   uu 
  AUAUCAUC UAUACUGUA GU Ucg  a
  |||||||| ||||||||| || |||   
  UGUAGUAG AUAUGACAU Ca agu  u
CA        -         -  c   gg 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-144-5p

• Accession: MIMAT0032367
• Description: Salmo salar ssa-miR-144-5p mature miRNA
• Sequence: 1 - GGAUAUCAUCAUAUACUGUAAGUU - 24
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-144-3p

• Accession: MIMAT0032368
• Description: Salmo salar ssa-miR-144-3p mature miRNA
• Sequence: 38 - CUACAGUAUAGAUGAUGUAC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482