Stem-loop lus-MIR166k

Accession

MI0026408

Description

Linum usitatissimum lus-MIR166k precursor miRNA

Literature search

2 open access papers mention lus-MIR166k
(5 sentences)

Sequence

1324206 reads, 234781.0 reads per million, 24 experiments

aggGGAAUUUCGACUGGUUCGAUgugauccaauuauuuaaccuucuaccaUCGGACCAGGCUUCAUUCCCCC
.(((((((.....(((((((((((.((................))...))))))))))).....))))))).

Structure

a       UUCGA           --u  uccaauu 
 ggGGAAU     CUGGUUCGAUg   ga       a
 |||||||     |||||||||||   ||        
 CCCCUUA     GACCAGGCUac   cu       u
C       CUUCG           cau  uccaauu 

Annotation confidence High

Genome context

Unknown

Mature lus-miR166k-5p

• Accession: MIMAT0058455
• Description: Linum usitatissimum lus-miR166k-5p mature miRNA
• Sequence: 4 - GGAAUUUCGACUGGUUCGAU - 23
• Evidence: experimental ; unknown

Mature lus-miR166k-3p

• Accession: MIMAT0031856
• Description: Linum usitatissimum lus-miR166k-3p mature miRNA
• Sequence: 51 - UCGGACCAGGCUUCAUUCCCCC - 72
• Evidence: not_experimental

References

1. PubMed ID: 22841625
   Identification and characterization of miRNAs and their potential targets in flax
   "Neutelings G, Fenart S, Lucau-Danila A, Hawkins S"
   "J Plant Physiol (2012) 169:1754-1766