Stem-loop cpa-MIR394b

Accession

MI0026368

Description

Carica papaya cpa-MIR394b precursor miRNA

Literature search

1 open access papers mention cpa-MIR394b
(1 sentences)

Sequence

UUGGCAUUCUGUCCACCUCCacugcgcaucgaccaauucaaaaaaaaaaaaaaaaaaaaaaagguacaaggaaaggaggugggcauacugucaaca
((((((...(((((((((((..(.(......(((............................)))....).)..)))))))))))...))))))..

Structure

--      UUC           ac g gcaucg   aauucaaaaaaaa 
  UUGGCA   UGUCCACCUCC  u c      acc             a
  ||||||   |||||||||||  | |      |||              
  aacugu   acggguggagg  a g      ugg             a
ac      cau           aa g --aaca   aaaaaaaaaaaaa 

Annotation confidence Low

Genome context

Unknown

Mature cpa-miR394b

• Accession: MIMAT0031816
• Description: Carica papaya cpa-miR394b mature miRNA
• Sequence: 1 - UUGGCAUUCUGUCCACCUCC - 20
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682