Stem-loop bma-mir-60

Accession

MI0026314

Description

Brugia malayi bma-mir-60 precursor miRNA

Sequence

ucagugcuuagcauugaacugugcauaaaauccaaucauuucuuauagugAUAUUAUGCACAUUUUCAUGCAAAgcauucaagu
..(((((((.((((.(((.(((((((((......((((((......)))))).))))))))).))).)))).))))))).....

Structure

---uc       a    u   c         aaucca      uc 
     agugcuu gcau gaa ugugcauaa      aucauu  u
     ||||||| |||| ||| |||||||||      ||||||   
     uuacgAA CGUA UUU ACACGUAUU      UAguga  u
ugaac       A    C   U         -----A      ua 

Annotation confidence Not enough data

Comments

This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].

Genome context

Bmal_v3_scaffold13: 700944-701027 [-]

Mature bma-miR-60

• Accession: MIMAT0031759
• Description: Brugia malayi bma-miR-60 mature miRNA
• Sequence: 51 - AUAUUAUGCACAUUUUCAUGCAAA - 74
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4


2. PubMed ID: 24824352
   Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
   Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
   PLoS One (2014) 9:e96498