Stem-loop bma-mir-268

Accession

MI0026294

Description

Brugia malayi bma-mir-268 precursor miRNA

Sequence

uccaauuauuUGAAAUGAUUAGAAGCAGUGUGUUcaauacuuuucccucacuauugaacuucaauuguuucaagaaauuauuucagauaaguuugaaauuuuac
..((((((((((((((((((.((((((((..((((((((............))))))))....))))))))....)))))))))))))))..))).........

Structure

-------uc   --               ---A        --GU        cuuuu 
         caa  uuauuUGAAAUGAUU    GAAGCAGU    GUUcaaua     c
         |||  |||||||||||||||    ||||||||    ||||||||      
         guu  aauagacuuuauuaa    cuuuguua    caaguuau     c
cauuuuaaa   ug               agaa        acuu        cacuc 

Annotation confidence Not enough data

Comments

This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].

Genome context

Bmal_v3_scaffold32: 63726-63829 [-]

Mature bma-miR-268

• Accession: MIMAT0031745
• Description: Brugia malayi bma-miR-268 mature miRNA
• Sequence: 11 - UGAAAUGAUUAGAAGCAGUGUGUU - 34
• Evidence: not_experimental

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4