Stem-loop bbe-mir-34g

Accession

MI0026279

Description

Branchiostoma belcheri bbe-mir-34g precursor miRNA

Literature search

1 open access papers mention bbe-mir-34g
(1 sentences)

Sequence

113 reads, 297.0 reads per million, 9 experiments

cguuucCUUGGCAGUGAUGUUAGUUGUUgucgucucgugucaCACAACAAACUGACAUCACUGCCUcuguagcgc
((((.....(((((((((((((((((((((.((........))))))).)))))))))))))))).....)))).

Structure

-    ucCUU                -     c  cuc 
 cguu     GGCAGUGAUGUUAGUU GUUgu gu   g
 ||||     |||||||||||||||| ||||| ||    
 gcga     CCGUCACUACAGUCAA CAACA Ca   u
c    ugucU                A     -  cug 

Annotation confidence Medium

Genome context

Unknown

Mature bbe-miR-34g-5p

• Accession: MIMAT0031730
• Description: Branchiostoma belcheri bbe-miR-34g-5p mature miRNA
• Sequence: 7 - CUUGGCAGUGAUGUUAGUUGUU - 28
• Evidence: not_experimental

Mature bbe-miR-34g-3p

• Accession: MIMAT0058597
• Description: Branchiostoma belcheri bbe-miR-34g-3p mature miRNA
• Sequence: 43 - CACAACAAACUGACAUCACUGCCU - 66
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500