Stem-loop bbe-mir-96

Accession

MI0026278

Description

Branchiostoma belcheri bbe-mir-96 precursor miRNA

Literature search

1 open access papers mention bbe-mir-96
(4 sentences)

Sequence

ccugccucuuucuugcucugUUUGGCACUAGCACAUUUUUGCUgggcagguguguaggCCAAAAUUGUUAGUGCCAAAUacagccugaaagacggacuuac
....((((((((..(((.(((((((((((((((.(((((.(((..(((....))).))).)))))))))))))))))))).)))..)))))).))......

Structure

--ccug  -      uu   c               C     U   gg   g 
      cc ucuuuc  gcu ugUUUGGCACUAGCA AUUUU GCU  gca g
      || ||||||  ||| ||||||||||||||| ||||| |||  |||  
      gg agaaag  cga aUAAACCGUGAUUGU UAAAA Cgg  ugu u
cauuca  c      uc   c               -     C   -a   g 

Annotation confidence Low

Genome context

Unknown

Mature bbe-miR-96-5p

• Accession: MIMAT0031728
• Description: Branchiostoma belcheri bbe-miR-96-5p mature miRNA
• Sequence: 21 - UUUGGCACUAGCACAUUUUUGCU - 43
• Evidence: not_experimental

Mature bbe-miR-96-3p

• Accession: MIMAT0031729
• Description: Branchiostoma belcheri bbe-miR-96-3p mature miRNA
• Sequence: 59 - CCAAAAUUGUUAGUGCCAAAU - 79
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500