Stem-loop bbe-mir-92a-1

Accession

MI0026272

Description

Branchiostoma belcheri bbe-mir-92a-1 precursor miRNA

Sequence

96131 reads, 2223.0 reads per million, 16 experiments

agaaguuagucaugacaagaAGGUCGUGAUAGGUGGCAAUGUuguacccaccucaaUAUUGCACUUGUCCCGGCCUUUuugc
...............(((((((((((.((((((((.((((((((.........)))))))))))))))).))))))))))).

Structure

agaaguuagucauga           U        G        uac 
               caagaAGGUCG GAUAGGUG CAAUGUug   c
               ||||||||||| |||||||| ||||||||   c
               guuUUUCCGGC CUGUUCAC GUUAUaac   a
--------------c           C        -        ucc 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-92a-5p

• Accession: MIMAT0031719
• Description: Branchiostoma belcheri bbe-miR-92a-5p mature miRNA
• Sequence: 21 - AGGUCGUGAUAGGUGGCAAUGU - 42
• Evidence: not_experimental

Mature bbe-miR-92a-3p

• Accession: MIMAT0031720
• Description: Branchiostoma belcheri bbe-miR-92a-3p mature miRNA
• Sequence: 57 - UAUUGCACUUGUCCCGGCCUUU - 78
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500