Stem-loop bbe-mir-4891

Accession

MI0026265

Description

Branchiostoma belcheri bbe-mir-4891 precursor miRNA

Sequence

51884 reads, 1247.0 reads per million, 16 experiments

uggcuguuugggAAGAUGAGCUGUUCUGCUACGGcugcgugucagacuagCGUAGCAGGACCCUCGUCUGcccaaacgucuggccucu
.(((((((((((.(((((((..(((((((((((.(((.((.....)))))))))))))))).))))))).)))))))....))))...

Structure

--u    ----       A       CU           G   c  g 
   ggcu    guuuggg AGAUGAG  GUUCUGCUACG cug gu u
   ||||    ||||||| |||||||  ||||||||||| ||| || c
   ccgg    caaaccc UCUGCUC  CAGGACGAUGC gau ca a
ucu    ucug       G       -C           -   -  g 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-4891-5p

• Accession: MIMAT0031708
• Description: Branchiostoma belcheri bbe-miR-4891-5p mature miRNA
• Sequence: 13 - AAGAUGAGCUGUUCUGCUACGG - 34
• Evidence: not_experimental

Mature bbe-miR-4891-3p

• Accession: MIMAT0031709
• Description: Branchiostoma belcheri bbe-miR-4891-3p mature miRNA
• Sequence: 51 - CGUAGCAGGACCCUCGUCUG - 70
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500