Stem-loop bbe-mir-34d

Accession

MI0026239

Description

Branchiostoma belcheri bbe-mir-34d precursor miRNA

Literature search

1 open access papers mention bbe-mir-34d
(1 sentences)

Sequence

1077 reads, 164.0 reads per million, 16 experiments

cgagcucgccaguuUGGCAGUGUGCGCCUACAGCUGACCCGguguuacacacgGGCCACUGUACACAUUGCCAGCcgggcgggucau
...(((((((.(.(((((((((((....(((((.((.(((((((...))).)))).)))))))))))))))))).).)))))))...

Structure

cga       a u           CGCC     C  A    -   u 
   gcucgcc g uUGGCAGUGUG    UACAG UG CCCG gug  
   ||||||| | |||||||||||    ||||| || |||| ||| u
   ugggcgg c GACCGUUACAC    AUGUC AC GGgc cac  
uac       g C           ----     -  C    a   a 

Annotation confidence High

Genome context

Unknown

Mature bbe-miR-34d-5p

• Accession: MIMAT0031674
• Description: Branchiostoma belcheri bbe-miR-34d-5p mature miRNA
• Sequence: 15 - UGGCAGUGUGCGCCUACAGCUGACCCG - 41
• Evidence: not_experimental

Mature bbe-miR-34d-3p

• Accession: MIMAT0058585
• Description: Branchiostoma belcheri bbe-miR-34d-3p mature miRNA
• Sequence: 54 - GGCCACUGUACACAUUGCCAGC - 75
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500