miRBase entry: ppe-MIR8127

Stem-loop ppe-MIR8127


Accession
MI0026158
Description
Prunus persica ppe-MIR8127 precursor miRNA


Sequence

uccaucccauuuccugcuuuggcuucuggguucuugccagaaggugcugaggCAACUGUGGACAUACCCUUUGaaaaaauggacauauagucuccaacccauuuccugcuuuagcaaaucacaugcagccuucaaguugucaauuuuUUCAAAGGGUACAUCCACAGUugccuugaaaccuucuagcaagaagccaggguccaagggaggaaaugggaugga
(((((((((((((((.((((((.((((((.(((((((.(((((((..(((((((((((((((..((((((((((((((((((((.....)))).((((.......((((...............)))).......))))...))))))))))))))))..)))))))))))))))..))))))).))))))).)))))).)))))).)))))))))))))))

Structure
               g      c      g       c       gc               CA                ggacauauagucuc    ccauuuc    uuuagc 
uccaucccauuuccu cuuugg uucugg uucuugc agaaggu  ugaggCAACUGUGGA  UACCCUUUGaaaaaau              caac       cugc      a
||||||||||||||| |||||| |||||| ||||||| |||||||  |||||||||||||||  ||||||||||||||||              ||||       ||||      a
agguaggguaaagga ggaacc gggacc aagaacg ucuucca  guuccguUGACACCU  AUGGGAAACUUuuuua              guug       gacg      a
               g      u      g       a       aa               AC                -----------acu    aacuucc    uacacu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrG2: 22081974-22082195 [+]

Database links

Mature ppe-miR8127-5p

Accession MIMAT0031546
Description Prunus persica ppe-miR8127-5p mature miRNA
Sequence 53 - CAACUGUGGACAUACCCUUUG - 73
Evidence experimental
Illumina [1]

Mature ppe-miR8127-3p

Accession MIMAT0031547
Description Prunus persica ppe-miR8127-3p mature miRNA
Sequence 148 - UUCAAAGGGUACAUCCACAGU - 168
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149