miRBase entry: ppe-MIR530

Stem-loop ppe-MIR530


Accession
MI0026137
Description
Prunus persica ppe-MIR530 precursor miRNA

Literature search
1 open access papers mention ppe-MIR530
(1 sentences)

Sequence

gauagccaagaugguuucauuuaUCUGCAUUUGCACCUGCACCUcuuuuggucuuuacugguuuucucaugcacugaugaacucagagauccaugcauaggugcaaguguaagugcagacaaaugccuucuugguuuuuuc
...((((((((.((...(((((.(((((((((((((.(((((((....((((((((...(((((..(((.....))).))))).))))).))).....))))))).))))))))))))).))))))).)))))))).....

Structure
--gau        u  uuu     a             C       -cuuu   -     acu     uc   u 
     agccaaga gg   cauuu UCUGCAUUUGCAC UGCACCU     ugg ucuuu   gguuu  uca g
     |||||||| ||   ||||| ||||||||||||| |||||||     ||| |||||   |||||  ||| c
     uugguucu cc   guaaa agacgugaaugug acgugga     acc agaga   ucaag  agu a
cuuuu        u  ---     c             a       uacgu   u     --c     -u   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrG7: 14976858-14976998 [-]

Database links

Mature ppe-miR530

Accession MIMAT0031513
Description Prunus persica ppe-miR530 mature miRNA
Sequence 24 - UCUGCAUUUGCACCUGCACCU - 44
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149