Stem-loop ppe-MIR399n

Accession

MI0026134

Description

Prunus persica ppe-MIR399n precursor miRNA

Literature search

4 open access papers mention ppe-MIR399n
(5 sentences)

Sequence

cagggcaaagucuccucuggcauguggccacuuacaauuauaaaugcuuccggcugggccucagugagcaaagccuugcauuauucuuguagugugcuuuaUGCCAAAGGAGAUUUGCUCGG
..(((((((.((((((.(((((((.(((((((.((((..((((.(((....((((..(((.....).))..))))..)))))))..)))))))).))).))))))).)))))))))))))..

Structure

ca       g      c       u   -    u    uu    a   uucc    gg  - u 
  gggcaaa ucuccu uggcaug ggc cacu acaa  auaa ugc    ggcu  gc c c
  ||||||| |||||| ||||||| ||| |||| ||||  |||| |||    ||||  || | a
  CUCGUUU AGAGGA ACCGUau ucg guga uguu  uauu acg    ccga  cg g g
GG       -      A       u   u    -    cu    -   --uu    aa  a u 

Annotation confidence Not enough data

Genome context

chrG3: 5253496-5253617 [-]

Mature ppe-miR399n

• Accession: MIMAT0031510
• Description: Prunus persica ppe-miR399n mature miRNA
• Sequence: 102 - UGCCAAAGGAGAUUUGCUCGG - 122
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149