miRBase entry: ppe-MIR395i

Stem-loop ppe-MIR395i


Accession
MI0026111
Description
Prunus persica ppe-MIR395i precursor miRNA

Literature search
3 open access papers mention ppe-MIR395i
(13 sentences)

Sequence

uguugucaggugucaccgagaguucccuuacucacuucauugggaaauaauuauuuuugauaaauuauauauccuaCUGAAGUGUUUGGGGGAACUCcugguugcauuugauuuuaca
(((.(((((((((.((((.(((((((((((..(((((((.(((((.((((((..........))))))...))))).)))))))..))))))))))).)))).)))))))))...)))

Structure
   --u         c    a           cu       u     --a      auuu 
ugu   gucaggugu accg gaguucccuua  cacuuca uggga   auaauu    u
|||   ||||||||| |||| |||||||||||  ||||||| |||||   ||||||     
aca   uaguuuacg uggu CUCAAGGGGGU  GUGAAGU auccu   uauuaa    u
   uuu         u    c           UU       C     aua      auag 


Annotation confidence Not enough data
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Genome context
chrG1: 27764456-27764573 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from ppe-MIR395i
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppe-miR395i

Accession MIMAT0031487
Description Prunus persica ppe-miR395i mature miRNA
Sequence 77 - CUGAAGUGUUUGGGGGAACUC - 97
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149