miRBase entry: mmu-mir-3535

Stem-loop mmu-mir-3535


Accession
MI0026036
Symbol
MGI: Mir3535
Description
Mus musculus mmu-mir-3535 precursor miRNA

Literature search
2 open access papers mention mmu-mir-3535
(3 sentences)

Sequence

22396 reads, 250 reads per million, 101 experiments
uuuggggcugucuuuauguuguugcugagaaaaugacaacUGGAUAUGAUGACUGAUUACCUGAGAaauaauugaugaaaucucaagaaaauuccucuagauagucaaguucugauccagcuaugucaacucaaagcagcaaccuug
.................(((((((((..((...(((((.((((((..((..((((((((.(((((.(((..((((.......))))....))).))).)).))))).)))))..))))))...)))))..))..)))))))))....

Structure
uuuggggcugucuuuau         ga  aaa     --a      AU  UG   -     C  -   A   --aa    ug 
                 guuguugcu  ga   ugaca   cUGGAU  GA  ACU GAUUA CU GAG aau    uuga  a
                 |||||||||  ||   |||||   ||||||  ||  ||| ||||| || ||| |||    ||||  a
                 caacgacga  cu   acugu   gaccua  cu  uga cugau ga cuc uua    aacu  a
-------------guuc         aa  -ca     auc      gu  --   a     a  u   c   aaag    cu 


Annotation confidence Not enough data
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Genome context
chr1: 86351981-86352127 [-]

Database links

Mature mmu-miR-3535

Accession MIMAT0031410
Description Mus musculus mmu-miR-3535 mature miRNA
Sequence 41 - UGGAUAUGAUGACUGAUUACCUGAGA - 66
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 23185045
    Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
    "Polikepahad S, Corry DB"
    "Nucleic Acids Res (2013) 41:1164-1177