Stem-loop mmu-mir-3535

Accession

MI0026036

Symbol

MGI: Mir3535

Description

Mus musculus mmu-mir-3535 precursor miRNA

Literature search

2 open access papers mention mmu-mir-3535
(3 sentences)

Sequence

22396 reads, 250 reads per million, 101 experiments

uuuggggcugucuuuauguuguugcugagaaaaugacaacUGGAUAUGAUGACUGAUUACCUGAGAaauaauugaugaaaucucaagaaaauuccucuagauagucaaguucugauccagcuaugucaacucaaagcagcaaccuug
.................(((((((((..((...(((((.((((((..((..((((((((.(((((.(((..((((.......))))....))).))).)).))))).)))))..))))))...)))))..))..)))))))))....

Structure

uuuggggcugucuuuau         ga  aaa     --a      AU  UG   -     C  -   A   --aa    ug 
                 guuguugcu  ga   ugaca   cUGGAU  GA  ACU GAUUA CU GAG aau    uuga  a
                 |||||||||  ||   |||||   ||||||  ||  ||| ||||| || ||| |||    ||||  a
                 caacgacga  cu   acugu   gaccua  cu  uga cugau ga cuc uua    aacu  a
-------------guuc         aa  -ca     auc      gu  --   a     a  u   c   aaag    cu 

Annotation confidence Not enough data

Genome context

chr1: 86351981-86352127 [-]

Mature mmu-miR-3535

• Accession: MIMAT0031410
• Description: Mus musculus mmu-miR-3535 mature miRNA
• Sequence: 41 - UGGAUAUGAUGACUGAUUACCUGAGA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23185045
   Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
   "Polikepahad S, Corry DB"
   "Nucleic Acids Res (2013) 41:1164-1177