miRBase entry: prd-mir-7964b

Stem-loop prd-mir-7964b


Accession
MI0025739
Description
Panagrellus redivivus prd-mir-7964b precursor miRNA


Sequence

UAGCCGUGUUUGGGACCCgugacgagaccggGUCGACCACUCGCUGCUACC
((((.(((..(((((((((.(......)))))))..)))..))).))))..

Structure
--    C   UU   --      u ac 
  UAGC GUG  UGG  GACCCg g  g
  |||| |||  |||  |||||| |   
  AUCG CGC  ACC  CUGggc c  a
CC    U   UC   AG      - ag 


Annotation confidence Not enough data
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Genome context
KB455532.1: 590143-590193 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from prd-mir-7964b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature prd-miR-7964b-5p

Accession MIMAT0030832
Description Panagrellus redivivus prd-miR-7964b-5p mature miRNA
Sequence 1 - UAGCCGUGUUUGGGACCC - 18
Evidence experimental
Illumina [1]

Mature prd-miR-7964b-3p

Accession MIMAT0030833
Description Panagrellus redivivus prd-miR-7964b-3p mature miRNA
Sequence 32 - GUCGACCACUCGCUGCUACC - 51
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295