miRBase entry: prd-mir-7959b

Stem-loop prd-mir-7959b


Accession
MI0025724
Description
Panagrellus redivivus prd-mir-7959b precursor miRNA


Sequence

CAAAAGUUUAAGUGCAAGCACaguuguugcuacaugugUACUAGCACUUUAACUUUUGAG
((((((((.((((((.((.(((..(((....)))..))).)).)))))).))))))))..

Structure
--        U      A  C   gu   u 
  CAAAAGUU AAGUGC AG ACa  ugu g
  |||||||| |||||| || |||  |||  
  GUUUUCAA UUCACG UC Ugu  aca c
GA        U      A  A   gu   u 


Annotation confidence Not enough data
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Genome context
KB455561.1: 619003-619062 [+]

Database links

Mature prd-miR-7959b-5p

Accession MIMAT0030804
Description Panagrellus redivivus prd-miR-7959b-5p mature miRNA
Sequence 1 - CAAAAGUUUAAGUGCAAGCAC - 21
Evidence experimental
Illumina [1]

Mature prd-miR-7959b-3p

Accession MIMAT0030805
Description Panagrellus redivivus prd-miR-7959b-3p mature miRNA
Sequence 39 - UACUAGCACUUUAACUUUUGAG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295