Stem-loop prd-mir-7938

Accession

MI0025688

Description

Panagrellus redivivus prd-mir-7938 precursor miRNA

Sequence

CGUGUCGGCUGUUGAUCACGGUuugccauuuugaaucauCGUGAUGAACAGCCGAUACGUC
(((((((((((((.((((((((...............)))))))).)))))))))))))..

Structure

--             G        uugcca 
  CGUGUCGGCUGUU AUCACGGU      u
  ||||||||||||| ||||||||      u
  GCAUAGCCGACAA UAGUGCua      u
CU             G        cuaagu 

Annotation confidence Not enough data

Genome context

KB455081.1: 77506-77566 [+]

Mature prd-miR-7938-5p

• Accession: MIMAT0030734
• Description: Panagrellus redivivus prd-miR-7938-5p mature miRNA
• Sequence: 1 - CGUGUCGGCUGUUGAUCACGGU - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7938-3p

• Accession: MIMAT0030735
• Description: Panagrellus redivivus prd-miR-7938-3p mature miRNA
• Sequence: 40 - CGUGAUGAACAGCCGAUACGUC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295