Stem-loop prd-mir-7935

Accession

MI0025684

Description

Panagrellus redivivus prd-mir-7935 precursor miRNA

Sequence

UUGAUCCCUGGCUUUAUGGCUguuacgucuuauugucaGCACUUUUGUUAGGGAUUGAUU
((((((((((((......((((..(((......)))))))......))))))))))))..

Structure

--            UUUAUG    uu   uc 
  UUGAUCCCUGGC      GCUg  acg  u
  ||||||||||||      ||||  |||   
  AGUUAGGGAUUG      CGac  ugu  u
UU            UUUUCA    --   ua 

Annotation confidence Not enough data

Genome context

KB455559.1: 206387-206446 [-]

Mature prd-miR-7935-5p

• Accession: MIMAT0030726
• Description: Panagrellus redivivus prd-miR-7935-5p mature miRNA
• Sequence: 1 - UUGAUCCCUGGCUUUAUGGCU - 21
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7935-3p

• Accession: MIMAT0030727
• Description: Panagrellus redivivus prd-miR-7935-3p mature miRNA
• Sequence: 39 - GCACUUUUGUUAGGGAUUGAUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295