miRBase entry: prd-mir-7900

Stem-loop prd-mir-7900


Accession
MI0025620
Description
Panagrellus redivivus prd-mir-7900 precursor miRNA


Sequence

UGGAAUGGGGUGUACCAUGACUGuuuuauugcaaucaAUCAUGGCAUAUCCUCUUCCCU
.((((.(((((((.((((((.((............)).)))))).))))))).))))..

Structure
-U    U       A      C  uuuua 
  GGAA GGGGUGU CCAUGA UG     u
  |||| ||||||| |||||| ||      
  CCUU UCCUAUA GGUACU ac     u
UC    C       C      A  uaacg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB455460.1: 1205681-1205739 [-]

Database links

Mature prd-miR-7900-5p

Accession MIMAT0030598
Description Panagrellus redivivus prd-miR-7900-5p mature miRNA
Sequence 1 - UGGAAUGGGGUGUACCAUGACUG - 23
Evidence experimental
Illumina [1]

Mature prd-miR-7900-3p

Accession MIMAT0030599
Description Panagrellus redivivus prd-miR-7900-3p mature miRNA
Sequence 38 - AUCAUGGCAUAUCCUCUUCCCU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295