miRBase entry: prd-mir-7892

Stem-loop prd-mir-7892


Accession
MI0025605
Description
Panagrellus redivivus prd-mir-7892 precursor miRNA


Sequence

GGGCAUGACUAAAUCGCCUGAGCguacuguaacccauaucgcUGAGGUAUUUAUUCAUGUUGAG
.(((((((.(((((.((((.((((...((.....))...)))).))))))))).)))))))...

Structure
--G       C     C    G    uac  u 
   GGCAUGA UAAAU GCCU AGCg   ug a
   ||||||| ||||| |||| ||||   || a
   UUGUACU AUUUA UGGA Ucgc   ac c
GAG       U     -    G    uau  c 


Annotation confidence Not enough data
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Genome context
KB455182.1: 6388-6451 [+]

Database links

Mature prd-miR-7892-5p

Accession MIMAT0030568
Description Panagrellus redivivus prd-miR-7892-5p mature miRNA
Sequence 1 - GGGCAUGACUAAAUCGCCUGAGC - 23
Evidence experimental
Illumina [1]

Mature prd-miR-7892-3p

Accession MIMAT0030569
Description Panagrellus redivivus prd-miR-7892-3p mature miRNA
Sequence 43 - UGAGGUAUUUAUUCAUGUUGAG - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295