Stem-loop prd-mir-7892

Accession

MI0025605

Description

Panagrellus redivivus prd-mir-7892 precursor miRNA

Sequence

GGGCAUGACUAAAUCGCCUGAGCguacuguaacccauaucgcUGAGGUAUUUAUUCAUGUUGAG
.(((((((.(((((.((((.((((...((.....))...)))).))))))))).)))))))...

Structure

--G       C     C    G    uac  u 
   GGCAUGA UAAAU GCCU AGCg   ug a
   ||||||| ||||| |||| ||||   || a
   UUGUACU AUUUA UGGA Ucgc   ac c
GAG       U     -    G    uau  c 

Annotation confidence Not enough data

Genome context

KB455182.1: 6388-6451 [+]

Mature prd-miR-7892-5p

• Accession: MIMAT0030568
• Description: Panagrellus redivivus prd-miR-7892-5p mature miRNA
• Sequence: 1 - GGGCAUGACUAAAUCGCCUGAGC - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7892-3p

• Accession: MIMAT0030569
• Description: Panagrellus redivivus prd-miR-7892-3p mature miRNA
• Sequence: 43 - UGAGGUAUUUAUUCAUGUUGAG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295