miRBase entry: prd-mir-7883b

Stem-loop prd-mir-7883b


Accession
MI0025585
Description
Panagrellus redivivus prd-mir-7883b precursor miRNA


Sequence

AUUUGAGUCCACGAUGCACCUUGuaacgguaauucaAGGUGCACCGUGAACUCAAAUAU
((((((((.((((.(((((((((...........))))))))).)))).))))))))..

Structure
--        C    A         uaac 
  AUUUGAGU CACG UGCACCUUG    g
  |||||||| |||| |||||||||    g
  UAAACUCA GUGC ACGUGGAac    u
UA        A    C         uuaa 


Annotation confidence Not enough data
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Genome context
KB455370.1: 23039-23097 [+]

Database links

Mature prd-miR-7883b-5p

Accession MIMAT0030528
Description Panagrellus redivivus prd-miR-7883b-5p mature miRNA
Sequence 1 - AUUUGAGUCCACGAUGCACCUUG - 23
Evidence experimental
Illumina [1]

Mature prd-miR-7883b-3p

Accession MIMAT0030529
Description Panagrellus redivivus prd-miR-7883b-3p mature miRNA
Sequence 37 - AGGUGCACCGUGAACUCAAAUAU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295