miRBase entry: prd-mir-7878

Stem-loop prd-mir-7878


Accession
MI0025577
Description
Panagrellus redivivus prd-mir-7878 precursor miRNA


Sequence

UGAAGGUGGCUCCAGAUCGUUGaauguugaauccaACGGUCUGUAGCUACCUUCACC
(((((((((((.((((((((((.((.....)).)))))))))).)))))))))))..

Structure
--           C          a  g 
  UGAAGGUGGCU CAGAUCGUUG au u
  ||||||||||| |||||||||| || u
  ACUUCCAUCGA GUCUGGCAac ua g
CC           U          c  a 


Annotation confidence Not enough data
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Genome context
KB454987.1: 1792-1848 [-]

Database links

Mature prd-miR-7878-5p

Accession MIMAT0030512
Description Panagrellus redivivus prd-miR-7878-5p mature miRNA
Sequence 1 - UGAAGGUGGCUCCAGAUCGUUG - 22
Evidence experimental
Illumina [1]

Mature prd-miR-7878-3p

Accession MIMAT0030513
Description Panagrellus redivivus prd-miR-7878-3p mature miRNA
Sequence 36 - ACGGUCUGUAGCUACCUUCACC - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295